MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
GL1.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 27
bases: 1,299,399 bps
CDS: 1,245
rRNA: 12
Repeat region:
tmRNA: 1
tRNA: 43
misc RNA:
Total features: 1,301
Total number of protein coding genes annotated/found:
1,245
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5006|JADGKJ010000017.1
SEQF5006_01271
Genome Viewer
NA
AA
309/103
452-760
hypothetical protein
SEQF5006|JADGKJ010000017.1
SEQF5006_01272
Genome Viewer
NA
AA
1899/633
958-2856
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
SEQF5006|JADGKJ010000017.1
SEQF5006_01273
Genome Viewer
NA
AA
1122/374
2843-3964
hypothetical protein
SEQF5006|JADGKJ010000017.1
SEQF5006_01274
Genome Viewer
NA
AA
489/163
3936-4424
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK
SEQF5006|JADGKJ010000017.1
SEQF5006_01275
Genome Viewer
NA
AA
669/223
4503-5171
TVP38/TMEM64 family inner membrane protein YdjZ
SEQF5006|JADGKJ010000017.1
SEQF5006_01276
Genome Viewer
NA
AA
561/187
5180-5740
TVP38/TMEM64 family inner membrane protein YdjZ
SEQF5006|JADGKJ010000017.1
SEQF5006_01277
Genome Viewer
NA
AA
486/162
6030-6515
N5-carboxyaminoimidazole ribonucleotide mutase
SEQF5006|JADGKJ010000017.1
SEQF5006_01278
Genome Viewer
NA
AA
1131/377
6502-7632
N5-carboxyaminoimidazole ribonucleotide synthase
SEQF5006|JADGKJ010000017.1
SEQF5006_01279
Genome Viewer
NA
AA
3759/1253
7625-11383
Phosphoribosylformylglycinamidine synthase
SEQF5006|JADGKJ010000017.1
SEQF5006_01280
Genome Viewer
NA
AA
720/240
11504-12223
Phosphoribosylaminoimidazole-succinocarboxamide synthase
SEQF5006|JADGKJ010000017.1
SEQF5006_01281
Genome Viewer
NA
AA
1479/493
12226-13704
Amidophosphoribosyltransferase
SEQF5006|JADGKJ010000017.1
SEQF5006_01282
Genome Viewer
NA
AA
1029/343
13704-14732
Phosphoribosylformylglycinamidine cyclo-ligase
SEQF5006|JADGKJ010000017.1
SEQF5006_01283
Genome Viewer
NA
AA
573/191
14722-15294
Phosphoribosylglycinamide formyltransferase
SEQF5006|JADGKJ010000017.1
SEQF5006_01284
Genome Viewer
NA
AA
1116/372
15434-16549
hypothetical protein
SEQF5006|JADGKJ010000017.1
SEQF5006_01285
Genome Viewer
NA
AA
792/264
17429-16638
Zinc transporter ZupT
SEQF5006|JADGKJ010000017.1
SEQF5006_01286
Genome Viewer
NA
AA
786/262
17730-18515
hypothetical protein
SEQF5006|JADGKJ010000017.1
SEQF5006_01287
Genome Viewer
NA
AA
1002/334
18760-19761
hypothetical protein
SEQF5006|JADGKJ010000017.1
SEQF5006_01288
Genome Viewer
NA
AA
750/250
20060-20809
Lactose phosphotransferase system repressor
SEQF5006|JADGKJ010000017.1
SEQF5006_01289
Genome Viewer
NA
AA
918/306
20809-21726
Tagatose-6-phosphate kinase
SEQF5006|JADGKJ010000017.1
SEQF5006_01290
Genome Viewer
NA
AA
1941/647
21754-23694
PTS system fructose-specific EIIABC component
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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